PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_33668-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 201aa    MW: 20990.8 Da    PI: 8.4967
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_33668-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB47.25.4e-154752495
            NF-YB 24 nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95
                     +a+i  da  +v+ cv efi +vt +a +    + +k ++g  ++ a+  lG+ +yv pl+ +l++yre+ g
  TRIUR3_33668-P1  4 RARIHPDATALVDRCVKEFINMVTVQAEEERGMDGKKKMTGLHVIKAFDILGYSNYVGPLTEHLRRYREVTG 75
                     6899*****************************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471133.24E-12375IPR009072Histone-fold
Gene3DG3DSA:1.10.20.101.6E-16488IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MDPRARIHPD ATALVDRCVK EFINMVTVQA EEERGMDGKK KMTGLHVIKA FDILGYSNYV  60
GPLTEHLRRY REVTGYVGVR RSNKRATAQR QAATGQMAPQ PSDTALGPPP AGITVQGELP  120
AAAVTTGGGG DGTTAVRLYI GCIAAGRCHG ARSGVGGHCD AATGRLNQQH HGCSALHCVS  180
GALSGVALAS SSRMPPACDD E
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM7ZKT01e-145M7ZKT0_TRIUA; Nuclear transcription factor Y subunit B-6
STRINGTRIUR3_33668-P11e-146(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.26e-12nuclear factor Y, subunit B6