PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34123-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 183aa    MW: 19947.2 Da    PI: 6.5078
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34123-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.87.8e-31152455
          G2-like  4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     +rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  TRIUR3_34123-P1  1 MRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 52
                     79*************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.05E-14153IPR009057Homeodomain-like
TIGRFAMsTIGR015576.3E-23153IPR006447Myb domain, plants
PROSITE profilePS512949.082155IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.0E-27152IPR009057Homeodomain-like
PfamPF002492.4E-7151IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MRWTTSLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTIKTTDHKP  60
AAASSYGQAK TIIDIPDDSS FDIANTSGSE SSVQQSNLDG NEHGSNMCAL WSNNSSSRGA  120
WSFHGKSRSD ANPGDIKSFE DVQSQCPNVV ADDAADLMSA PFRLSELVVG TKKPNLDFTL  180
GRM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A8e-18154457Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-18154457Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-18154457Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-18154457Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-18154558Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0369114e-75BT036911.1 Zea mays full-length cDNA clone ZM_BFb0147F05 mRNA, complete cds.
GenBankKJ7268294e-75KJ726829.1 Zea mays clone pUT3369 G2-like transcription factor (GLK47) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156179.11e-129probable transcription factor KAN2 isoform X1
TrEMBLA0A3B6NQV81e-131A0A3B6NQV8_WHEAT; Uncharacterized protein
TrEMBLA0A446VK521e-131A0A446VK52_TRITD; Uncharacterized protein
TrEMBLM7ZE581e-134M7ZE58_TRIUA; Putative transcription factor KAN2
STRINGTraes_6AL_B2256B77F.21e-132(Triticum aestivum)
STRINGTRIUR3_34123-P11e-135(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94383445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17695.13e-37G2-like family protein