PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34281-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 267aa    MW: 29003.9 Da    PI: 4.6529
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34281-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.4e-32142197358
                      -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                      Dgy+WrKYGqK +k++++prsYY+Ctsa+C++kk+ve+s+edp+++++tYeg+H h
  TRIUR3_34281-P1 142 DGYRWRKYGQKFIKNNPHPRSYYKCTSARCSAKKHVEKSTEDPEMLIVTYEGSHLH 197
                      9*****************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.4E-31126198IPR003657WRKY domain
SuperFamilySSF1182902.09E-26139199IPR003657WRKY domain
SMARTSM007744.7E-36140199IPR003657WRKY domain
PfamPF031061.4E-26142197IPR003657WRKY domain
PROSITE profilePS5081128.013142200IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MGDVLRAHDA AATAADDEAG VWPGELDEQL IRELLSDDSL LGSMAPPDDG SERPYRSCGT  60
GGAPAAAPCN EPLPLASASS MALCSSYSGP TIRDIEKALW SRPYTSTQRY GSLYLYGAPG  120
TAPERKHTTK VRSCGGGKTP MDGYRWRKYG QKFIKNNPHP RSYYKCTSAR CSAKKHVEKS  180
TEDPEMLIVT YEGSHLHGPQ TTTQRQPKCA SLSPDLPSPP EAEKEAECRH APEKEAECPD  240
HSPEEEAECL DSPEEEEEEA EASSSEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-211421971974Probable WRKY transcription factor 4
2lex_A1e-211421971974Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3626861e-158AK362686.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2009G15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148291.11e-134uncharacterized protein LOC109733478 isoform X2
TrEMBLM7YYP30.0M7YYP3_TRIUA; Putative WRKY transcription factor 49
STRINGTRIUR3_34281-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131442633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.22e-23WRKY DNA-binding protein 57