PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34835-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 126aa    MW: 14877.6 Da    PI: 8.764
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34835-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.91.8e-27111710128
              NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102
                      td e++  yL++k +g++l++ ++ike+d+++ +P + ++k+ ++++  wy Fs+rd+ky++g+r+ r++    Wk++gk+++vl+k++ ++g 
  TRIUR3_34835-P1   1 TDAEII-WYLERKYHGHPLPV-NFIKEFDVFEDHPDTVQEKYGESQEgVWYVFSSRDRKYKNGTRPVRSVG-TAWKSSGKEEDVLDKNNVKIGR 91 
                      799999.9*************.99**************965555444499******************755.88******************** PP

              NAM 103 kktLvfykgrapkgektdWvmheyrl 128
                       +tL+f  g++pkg++t W ++eyr+
  TRIUR3_34835-P1  92 VNTLTFKLGHQPKGTSTPWRLKEYRM 117
                      ************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.02E-281120IPR003441NAC domain
PfamPF023653.6E-101117IPR003441NAC domain
PROSITE profilePS5100525.1061126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
TDAEIIWYLE RKYHGHPLPV NFIKEFDVFE DHPDTVQEKY GESQEGVWYV FSSRDRKYKN  60
GTRPVRSVGT AWKSSGKEED VLDKNNVKIG RVNTLTFKLG HQPKGTSTPW RLKEYRMEKY  120
QEDPNP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A7e-19111729145NAC domain-containing protein 19
3swm_B7e-19111729145NAC domain-containing protein 19
3swm_C7e-19111729145NAC domain-containing protein 19
3swm_D7e-19111729145NAC domain-containing protein 19
3swp_A7e-19111729145NAC domain-containing protein 19
3swp_B7e-19111729145NAC domain-containing protein 19
3swp_C7e-19111729145NAC domain-containing protein 19
3swp_D7e-19111729145NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229598.34e-34NAC domain-containing protein 67
TrEMBLA0A3B6KRZ61e-83A0A3B6KRZ6_WHEAT; Uncharacterized protein
TrEMBLT1NVE91e-88T1NVE9_TRIUA; Uncharacterized protein
STRINGTRIUR3_34835-P12e-89(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131302130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-21NAC domain containing protein 25