PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_35346-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 84aa    MW: 8614.73 Da    PI: 7.4406
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_35346-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025930223
                     EETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                     +Cp+C ++F +   L  H r+H
  TRIUR3_35346-P1  9 ECPYCYRVFASGQALGGHKRSH 30
                     5******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.746830IPR007087Zinc finger, C2H2
PfamPF139122.3E-12830IPR007087Zinc finger, C2H2
PROSITE patternPS0002801030IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MDGKGSPREC PYCYRVFASG QALGGHKRSH VCSAAAAAAQ AHAAAAPPAP IKAFGMIDLN  60
IALPFEDVEL SAVSDPRFSS NPGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186301.19e-43zinc finger protein ZAT1-like
TrEMBLA0A3B6NSI75e-51A0A3B6NSI7_WHEAT; Uncharacterized protein
TrEMBLA0A446VIS45e-51A0A446VIS4_TRITD; Uncharacterized protein
TrEMBLM7YQR21e-53M7YQR2_TRIUA; Uncharacterized protein
STRINGTraes_6AL_779D5240A.29e-52(Triticum aestivum)
STRINGTRIUR3_35346-P12e-54(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35183377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.14e-11C2H2-like zinc finger protein