PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_35464-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 174aa    MW: 19844.3 Da    PI: 5.9414
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_35464-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-101111501054
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +rRR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k L
  TRIUR3_35464-P1 111 KRRRHKINERLRVLQHLIPNG-----TKVDISTMLEEAVQYVKFL 150
                      9******************97.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-13100164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.602101150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-12105156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-9107156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.48E-9110155No hitNo description
PfamPF000101.4E-7111150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MEEAECASCW GSLDAICEES EMIAHLQSVL WCDSDSDANL RSSKNDSTNE SFDLQVNDLS  60
SANERDIGIK RKMQVDEQSD HHNEVPAVLS APRKSGNKSR AAMDSQSNYA KRRRHKINER  120
LRVLQHLIPN GTKVDISTML EEAVQYVKFL HMQIKDSIFI LDCLNNVNNK IYFK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163881.17e-91transcription factor bHLH54-like
TrEMBLT1NX421e-126T1NX42_TRIUA; Uncharacterized protein
STRINGTRIUR3_35464-P11e-127(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145082123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-26bHLH family protein