PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG029785t1
Common NameTCM_029785
Organism
Theobroma cacao
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family VOZ
Protein Properties Length: 481aa    MW: 53475.2 Da    PI: 5.8623
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG029785t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ442.26.3e-1362044201217
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                       pppsaflgpkcalwdc+rpaqg +w+qdycssfha+la+neg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+
  Thecc1EG029785t1 204 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALAMNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAP 296
                       89******************************************************************************************* PP

               VOZ  94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrle 186
                       elfdls+l+getirewlffdkprrafesgnrkqrslpdysgrgwhesrkq+m+efgglkrsyymdpqp+++fewhlyeyein++d +alyrle
  Thecc1EG029785t1 297 ELFDLSVLDGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQIMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDVCALYRLE 389
                       ********************************************************************************************* PP

               VOZ 187 lklvdekksakgkvskdsladlqkklgrlta 217
                       lklvd+kksakgk ++d++adlqk++grlta
  Thecc1EG029785t1 390 LKLVDGKKSAKGKSANDTVADLQKQMGRLTA 420
                       *****************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MGKGSKSNCK SASHKLFKDR AKNRVDDLQG MFLDLQFARK ESRSIDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEEDDA TSALAAPKPE PNDQSLQVED  120
AAAFQEGYGV NQRHHERGFP LVDRCRDSPS GVRAMSINNL EGATQLEYRQ FDLLQDFEHF  180
YTGTSFCVED AMPHTSSYLP SICPPPSAFL GPKCALWDCP RPAQGLDWCQ DYCSSFHAAL  240
AMNEGPPGMG PVLRPGGIGL KDGLLFAALS AKAQGKDVGI PECEGAATAK SPWNAPELFD  300
LSVLDGETIR EWLFFDKPRR AFESGNRKQR SLPDYSGRGW HESRKQIMNE FGGLKRSYYM  360
DPQPLNHFEW HLYEYEINKC DVCALYRLEL KLVDGKKSAK GKSANDTVAD LQKQMGRLTA  420
EFPSDNKRYV KGRGKINAKV GVGNLYATPN VVAPTSEKFD YGLGVQYDYL VDNLTGYYLT  480
*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007025509.10.0PREDICTED: transcription factor VOZ1
RefseqXP_007025511.10.0PREDICTED: transcription factor VOZ1
RefseqXP_017978954.10.0PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A061GFE20.0A0A061GFE2_THECC; Vascular plant one zinc finger protein isoform 1
STRINGEOY281330.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66672745
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  4. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  5. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]