PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10003386m
Common NameEUTSA_v10003386mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 395aa    MW: 44371.6 Da    PI: 9.8995
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10003386mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.93.8e-12328376452
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                       k +rrk+kNRe+A rsR+RK+a+i eLe + k+L++eN++L  +  +l
  Thhalv10003386m 328 EKTQRRKIKNRESAARSRARKQAQIMELEAEYKKLKKENQELLRRQRML 376
                      589*************************************998776555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-6325388IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.795327377IPR004827Basic-leucine zipper domain
PfamPF001702.8E-9328373IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.4E-11329377No hitNo description
SuperFamilySSF579595.94E-9329377No hitNo description
CDDcd147074.76E-19331376No hitNo description
PROSITE patternPS000360332347IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MDSNWNFGSL GTAPLGMMNI PVSTPLNRQG SIYSWTLDQI QNNLGKDCGS MYMEELLKNI  60
CSAEETQGMV STNGLNDGLQ RQRSIILPQI LSQKTIDEVW KYITEEEEHT NKVGGSTNIP  120
QIQRQQTLGE VTLEEFLTRA GATGNNNSSG YIHEPSSSIS RNRNKNLSFD KFQQEPMVSH  180
LLNNNVARSR NYGSNFHPSL SVSMSYQPQQ QQQNQFLPQQ PIMSKTHGYE PQLAFTSGQI  240
NNYGLRDSFM EIGDQSHQQK NISLVPSNAT IPSGTMSVDT CSRITTFPQS DGIQKIGVGS  300
SLVSPFPYIS SGGNNARGRN NNNDIAAEKT QRRKIKNRES AARSRARKQA QIMELEAEYK  360
KLKKENQELL RRQRMLNLQG RSERKMRRTK SDIN*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10003386m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024013188.10.0myb-like protein O
SwissprotQ9FMM73e-99AI5L8_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 8
TrEMBLV4NF940.0V4NF94_EUTSA; Uncharacterized protein
STRINGXP_006403328.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156311417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42910.17e-81bZIP family protein