PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10005347m
Common NameEUTSA_v10005347mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 187aa    MW: 21625.1 Da    PI: 6.6813
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10005347mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.86.6e-1572133263
                      XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++++r+rr+ +NRe+ArrsR RKk +ieeL++ v++L   N+ L +++ +l +   ++ +e+
  Thhalv10005347m  72 PDDRRARRMVSNRESARRSRMRKKRQIEELQQQVEQLMMLNHHLSEKVINLLESNHQVMQEN 133
                      689********************************************999988888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1671135IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-1272128No hitNo description
PROSITE profilePS5021711.32373136IPR004827Basic-leucine zipper domain
PfamPF001701.3E-1274133IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.0E-1175130No hitNo description
CDDcd147022.90E-1676127No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MEPPSVHRSH CFDILEGMPP QDDHFNSAFL PNTDFHVQLQ SVSPNLSSRS NNNRSHLDPN  60
GENIYHNEGL DPDDRRARRM VSNRESARRS RMRKKRQIEE LQQQVEQLMM LNHHLSEKVI  120
NLLESNHQVM QENSQLKEKV SYFQLLMAEM LIPMRNGDGS INVNHLRGET SNRTSDFFAS  180
STMIET*
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10005347m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024007374.11e-129basic leucine zipper 43
TrEMBLV4KWU61e-134V4KWU6_EUTSA; Uncharacterized protein
STRINGXP_006394562.11e-134(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.19e-81basic leucine-zipper 70