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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Thhalv10010981m |
| Common Name | EUTSA_v10010981mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
GRAS |
| Protein Properties |
Length: 417aa MW: 46569.3 Da PI: 6.4447 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10010981m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 323.7 | 3.6e-99 | 34 | 413 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilk 92
++lLl+cA+a++s+d++l +++L+ l+++a +dg ++++Rl++ f++AL +r + ++++l++++ +++ + +++++++l f++++P+++
Thhalv10010981m 34 EQLLLHCATAIDSNDAALSHQILWVLNNIAPQDGdSSTKRLTSAFVRALLSRAVTKSPTLFSTVFQPPAT---ELHRFSVVELagFVDLTPWHR 124
79********************************6799*****************9*****988555555...566666666677********* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.. 181
f++++aN aIl aveg ++vHi+D+++++++Q p+L++a+as+ ++pp l++T+v+s++ + + ++ee+g++L +fA++ ++++ef+++
Thhalv10010981m 125 FGYIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASKLNKPPLLKLTVVSSST-FppfINVSYEELGSKLVNFATTRNIEMEFSIIps 217
*********************************************************55.45899**************************988 PP
GRAS 182 .vakrledleleeLrvkp...gEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
+++ +++l l++Lr+ p +Eal+Vn++++l +++de+++ +s r+ +Lk+++sl+P++v+++e++ad++se+++ r+ +a++y++
Thhalv10010981m 218 tHSDGFSSL-LQQLRIYPfsfNEALVVNCHMMLRYIPDETLTPSSsslsLRNIFLKQLRSLNPTIVTLIEEDADLTSEDLVSRLRSAFNYFWIP 310
666677777.9***************************99877766677899****************************************** PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvl 360
fd++++ + se+r+++E+e ++++i+nvva+egaer+er+et+++W er++ea F+ v+++e+a+++ k++l++++ ++g++ +++++slvl
Thhalv10010981m 311 FDTTDTFV---SEKRRWYEAE-ISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEEAVADLKAMLEEHGvGWGMKKDDDDESLVL 400
*******7...9*********.************************************************************************ PP
GRAS 361 gWkdrpLvsvSaW 373
+Wk++++v++++W
Thhalv10010981m 401 TWKGHSVVFATVW 413
************* PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MTKTRILNPT RFPPPKSLRS GGGGGGGGHA SFMEQLLLHC ATAIDSNDAA LSHQILWVLN 60
NIAPQDGDSS TKRLTSAFVR ALLSRAVTKS PTLFSTVFQP PATELHRFSV VELAGFVDLT 120
PWHRFGYIAA NAAILTAVEG YSTVHIVDLS LTHCMQIPTL IDAMASKLNK PPLLKLTVVS 180
SSTFPPFINV SYEELGSKLV NFATTRNIEM EFSIIPSTHS DGFSSLLQQL RIYPFSFNEA 240
LVVNCHMMLR YIPDETLTPS SSSLSLRNIF LKQLRSLNPT IVTLIEEDAD LTSEDLVSRL 300
RSAFNYFWIP FDTTDTFVSE KRRWYEAEIS WKIENVVAKE GAERVERTET KRRWIERMRE 360
AEFGGVRVKE EAVADLKAML EEHGVGWGMK KDDDDESLVL TWKGHSVVFA TVWVPV*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
