PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10013166m
Common NameEUTSA_v10013166mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family EIL
Protein Properties Length: 550aa    MW: 62543.4 Da    PI: 7.2673
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10013166mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3376.83.5e-115474191354
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                      eel+k+ wkd+++lkrlke++k  l+++ +       s + +e+++++ m +aQD iLk+M k me c+aqGfvYgi+ e+gk+v+g+sd+Lr+
  Thhalv10013166m  47 EELEKKIWKDKQRLKRLKEKSKIGLGKRLEVkQPDDDSPELQEHSSKRMMYQAQDKILKHMSKAMERCKAQGFVYGIVFENGKTVTGSSDNLRE 140
                      8*********************9887766531334455599***************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
             EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                      WWk+kv+fdrngpaai k+q + + ++g++  +  ++ + h+l elqDTtlg+LLsalm  c+ppqrr+plekg++pPWWPtGke+ww+ l+l+
  Thhalv10013166m 141 WWKDKVRFDRNGPAAILKHQRDINSPDGSELGSETGNCTAHKLLELQDTTLGALLSALMPNCKPPQRRYPLEKGLTPPWWPTGKEDWWDDLSLP 234
                      **********************9999999988888*********************************************************** PP

                      TT--...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.............. CS
             EIN3 188 kdqg..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.............. 265
                      +d +  +ppykkphdlkk wkv+vL  vi+hm+ +i++i +l+r+s++lq+km+++e   +l+ ln+e++++++ + ++               
  Thhalv10013166m 235 EDCRglAPPYKKPHDLKKLWKVGVLIGVIRHMASDINNIPKLVRRSRSLQEKMTSREGSLWLAALNREKAIIDQNHHRPLtiisgednnngsnn 328
                      ************************************************************************9988884345666777777666 PP

                      ...XXXXXXXXXXXXXXXXXXXX...XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
             EIN3 266 ...slrkqspkvtlsceqkedve...gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                          ++ +  +v + +++++dve   g +++     q  + +++f+ v krk  ++ +  vs +  + tc++s +++s+++++f+d+  +++++
  Thhalv10013166m 329 lvpGTSGDTDHVLFPESADYDVEgmvGSHHRL--IPQFPEYENNFNGVYKRK--FGGDLGVSLHPRIFTCENSLCPYSQPQMGFHDRITRENHQ 418
                      65433346677778888888888543333333..3466666779******98..6777777777789**************************9 PP

                      X CS
             EIN3 354 y 354
                      +
  Thhalv10013166m 419 M 419
                      6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048739.9E-11047303No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-59175310IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.18E-53180306IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MYNNNNTGIF RGLASSPVPR FSKGGDVSSA SLTPLYDELT DEETEIEELE KKIWKDKQRL  60
KRLKEKSKIG LGKRLEVKQP DDDSPELQEH SSKRMMYQAQ DKILKHMSKA MERCKAQGFV  120
YGIVFENGKT VTGSSDNLRE WWKDKVRFDR NGPAAILKHQ RDINSPDGSE LGSETGNCTA  180
HKLLELQDTT LGALLSALMP NCKPPQRRYP LEKGLTPPWW PTGKEDWWDD LSLPEDCRGL  240
APPYKKPHDL KKLWKVGVLI GVIRHMASDI NNIPKLVRRS RSLQEKMTSR EGSLWLAALN  300
REKAIIDQNH HRPLTIISGE DNNNGSNNLV PGTSGDTDHV LFPESADYDV EGMVGSHHRL  360
IPQFPEYENN FNGVYKRKFG GDLGVSLHPR IFTCENSLCP YSQPQMGFHD RITRENHQMN  420
CPYKATTFYQ PPKPFGMPTG LVAPYPGYNR SFHGNKQENQ EEMQEQVQQQ FNPLNNLYRP  480
KAEQRGGNIN DYVSDHRFAL VDNLCPSTSV MNLNSGLVLP TEFNGNGETV RIDNNLQNRE  540
EHLPLPWIE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-511793052126Protein ETHYLENE INSENSITIVE 3
4zds_B9e-511793052126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10013166m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006400682.10.0ETHYLENE INSENSITIVE 3-like 2 protein
SwissprotO231150.0EIL2_ARATH; ETHYLENE INSENSITIVE 3-like 2 protein
TrEMBLV4KVW70.0V4KVW7_EUTSA; Uncharacterized protein
STRINGXP_006400682.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM147191621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21120.10.0ETHYLENE-INSENSITIVE3-like 2