PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Thhalv10014931m

Common Name

EUTSA_v10014931mg

Organism

Eutrema salsugineum

Taxonomic ID

72664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema

Family

bZIP

Protein Properties

Length: 150aa MW: 17535.2 Da PI: 9.6978

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Thhalv10014931m	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	52	102	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 kr +r +NR+AA++sR +K++++e L +k+keL + + L+ ++ + +++ Thhalv10014931m 52 KRLKRILSNRVAAQKSRWKKLQYVEDLVKKSKELHRQVSVLRCQVGMASEQ 102 99*********************************9999998777666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.9E-11	45	108	No hit	No description
SMART	SM00338	2.0E-10	48	112	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.048	50	113	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	5.9E-10	50	98	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.48E-10	52	107	No hit	No description
CDD	cd14703	2.16E-11	53	104	No hit	No description
PROSITE pattern	PS00036	0	55	70	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence Send to blast
MSEPRFPVPR SFQVSNSGSQ EEEKKAGYVN YEVEPGFTIR LRQNIDPAMD PKRLKRILSN 60 RVAAQKSRWK KLQYVEDLVK KSKELHRQVS VLRCQVGMAS EQKRCLEDEQ MELKECISAW 120 FQHFISNEGE IEAYRAEIER LKKKMANMI*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Thhalv10014931m

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006399196.1	1e-107	basic leucine zipper 6
TrEMBL	V4LAH9	1e-106	V4LAH9_EUTSA; Uncharacterized protein
STRING	XP_006399196.1	1e-106	(Eutrema salsugineum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM14418	18	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07160.1	7e-66	bZIP family protein

Link Out ? help Back to Top
Phytozome	Thhalv10014931m
Entrez Gene	18017518