PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10016635m
Common NameEUTSA_v10016635mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family VOZ
Protein Properties Length: 458aa    MW: 51610.5 Da    PI: 5.1694
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10016635mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ4151.3e-1272244372215
              VOZ   2 ppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 
                      ppsaflgpkcalwdc+rpa+gs+w+ dycs +h +lalne++pgt+pvlrp+gi+lkd+ll++al+ak+ gk+vgip+cega+++k+pwnaael
  Thhalv10016635m 224 PPSAFLGPKCALWDCARPAHGSDWYLDYCSDYHGNLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTLGKNVGIPVCEGAVNTKCPWNAAEL 317
                      7********************************************************************************************* PP

              VOZ  96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelkl 189
                      f+l+l+egetirewlffdkprra++sgnrkqrslpdysgrgwhesrkq+mke++g+krsyymdpqp++ +ewhl+ey+ine+d++alyrlelkl
  Thhalv10016635m 318 FHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQQGQKRSYYMDPQPPGPYEWHLFEYQINESDECALYRLELKL 411
                      ********************************************************************************************** PP

              VOZ 190 vdekksakgkvskdsladlqkklgrl 215
                      +++kks+k+kv+kd+ladlqkk+ ++
  Thhalv10016635m 412 TNGKKSPKAKVAKDPLADLQKKMEKM 437
                      ***********************986 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MSNNPKITCV SSSHQNLVEK LMELQERFCH LQAARKEGRF SDHAILEAQI SQNLREWQAE  60
LSAPSPESSL LGGSISHFSE EIARLLKLND EEDDATSSLK EHSAPKPEGF AQSLCPPEHL  120
EWTDEPFIQS PFNVNFSSGF EDAVNNTETH DQQLHFAFQE FDSSINPPDF HDQKLNNLDI  180
TSQLDYHLSE VRQEFKNSSS VKLDGSGEFE SFAEFTPPSS VRVPPSAFLG PKCALWDCAR  240
PAHGSDWYLD YCSDYHGNLA LNEDSPGTAP VLRPGGISLK DNLLIDALRA KTLGKNVGIP  300
VCEGAVNTKC PWNAAELFHL ELVEGETIRE WLFFDKPRRA YDSGNRKQRS LPDYSGRGWH  360
ESRKQLMKEQ QGQKRSYYMD PQPPGPYEWH LFEYQINESD ECALYRLELK LTNGKKSPKA  420
KVAKDPLADL QKKMEKMGQL TPEVASDKPS PPTKRNS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ1 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Binds as a dimer to the palindromic sequence 5'-GCGTNNNNNNNACGC-3'. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00018PBMTransfer from AT2G42400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10016635m
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. Down-regulated by far-red light (at protein level). {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006411498.10.0transcription factor VOZ2
SwissprotQ9SLB90.0VOZ2_ARATH; Transcription factor VOZ2
TrEMBLV4P0Z40.0V4P0Z4_EUTSA; Uncharacterized protein
STRINGXP_006411498.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110602534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42400.10.0vascular plant one zinc finger protein 2
Publications ? help Back to Top
  1. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  2. Koguchi M,Yamasaki K,Hirano T,Sato MH
    Vascular plant one-zinc-finger protein 2 is localized both to the nucleus and stress granules under heat stress in Arabidopsis.
    Plant Signal Behav, 2017. 12(3): p. e1295907
    [PMID:28277968]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]