PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10023536m
Common NameEUTSA_v10023536mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 371aa    MW: 41831.6 Da    PI: 9.3509
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10023536mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.41.3e-072362821763
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      A+rsR RK+++i eLe+ v++L+ae ++   el+ l++    l +e+
  Thhalv10023536m 236 AQRSRVRKLQYISELERNVQALQAEGSKVSAELDFLNQRNLILSMEN 282
                      89********************************9999887777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0095229284IPR004827Basic-leucine zipper domain
CDDcd147031.26E-14229275No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-5236275No hitNo description
SuperFamilySSF579591.59E-5236278No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MAGSKGSESV KNLMYSGKNA LLPPKIPFPS VSASYTEYIP CGLIGSRHSQ KLSHDKTHHQ  60
RTSSESHLVE ELPFWLDDLL NEPESPARKC GHRRSSSDSY AYLDVANATN ISLTLQNNFS  120
YRNPVSSVQR GIQGSDRRKN TEDAPFYADA SFLKQKNRQR DSLVASGARS CWQLPSAREN  180
VGVKNMGASY MSQEATAETM NYADDPKRFS SEENNSSPQP VTYEFDNIKR AKQQFAQRSR  240
VRKLQYISEL ERNVQALQAE GSKVSAELDF LNQRNLILSM ENKALKHRLE SIAQDKLIKQ  300
LEQEVLENEI GRLRALYQQQ QQEQQAHKPS ANNGRATSKD LESKFSSLSL NTKDTNCRRD  360
SVSVMGQFHF *
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10023536m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006392331.10.0uncharacterized protein At4g06598
TrEMBLV4KIA60.0V4KIA6_EUTSA; Uncharacterized protein
STRINGXP_006392331.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33602444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.20.0bZIP family protein