PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Thhalv10027117m

Common Name

EUTSA_v10027117mg

Organism

Eutrema salsugineum

Taxonomic ID

72664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema

Family

bZIP

Protein Properties

Length: 246aa MW: 28612.8 Da PI: 5.9159

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Thhalv10027117m	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.1	3.3e-12	133	178	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ +r+++NRe+ArrsR RK+ i++L++ v L+ eN++L ++l Thhalv10027117m 133 RKRKRMESNRESARRSRMRKQSHIDNLRNQVNRLDLENRELGNRLR 178 67899**********************************9995554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.8E-10	124	179	No hit	No description
SMART	SM00338	5.9E-14	129	193	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.887	131	194	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.0E-9	133	177	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.53E-10	133	182	No hit	No description
CDD	cd14702	2.59E-17	134	180	No hit	No description
PROSITE pattern	PS00036	0	136	151	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MLSTVPAFSF SEPGLVNHFS GFQTGFTPWE WDSPDLFSVN QLSLEPAVPS PCYCESDTGL 60 VRINSGFDDT KSGSDEPCAD FIETKPRFDD VDISHGEPDS DDPKHLTSNP NLDSGEQNHN 120 RNIFSQPEMT DERKRKRMES NRESARRSRM RKQSHIDNLR NQVNRLDLEN RELGNRLRLV 180 IYQLQRVNTD NNRLLTEQEI LRLRLSEMRR ILINRQLQQQ QHWELYNRRM NMAAQNPSSI 240 IDHMI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	152	RRSRMRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Thhalv10027117m

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006411856.1	0.0	basic leucine zipper 61
TrEMBL	V4MAA1	0.0	V4MAA1_EUTSA; Uncharacterized protein
STRING	XP_006411856.1	0.0	(Eutrema salsugineum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM7855	18	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37730.1	1e-107	basic leucine-zipper 7

Link Out ? help Back to Top
Phytozome	Thhalv10027117m
Entrez Gene	18030103