 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thhalv10028622m |
| Common Name | EUTSA_v10028622mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
GRAS |
| Protein Properties |
Length: 482aa MW: 53721.6 Da PI: 5.4252 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10028622m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 319.3 | 7.9e-98 | 102 | 473 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPi 90
lv+lL+++Aea + d++ l++ +Larl+el+sp++ ++m+Rla +ft +L++ l r ++ + +p + ++ + ++++l+a ++++++sP+
Thhalv10028622m 102 LVHLLVAAAEASTGLDKTreLTRVILARLKELVSPSDrTNMERLADHFTDGLSKLLER--ANVQRHSSPHQHRDVHhQVDVLSAIQMLQNMSPY 193
689*********985544349***********9999989*******************..5555555555544444499*************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
++f+++ta qaIleav+ e+r+Hi+D+di++G+QW++L+qaL +++ gp +lRiT+++++++g s +++e g+rL+ fAe++g pf+++
Thhalv10028622m 194 VNFGYFTASQAILEAVKYERRIHILDYDITEGVQWASLMQALVCKNTGPLtqHLRITALSRATNGkkSIAAVQEAGRRLTAFAESIGQPFSYHH 287
**********************************************886445*********999988999***********************9 PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdslea 273
++++++ ++L++ +gEa+++n++l+l r+ +++ ++ ++L k+l+Pk+v++v++e+ + +++s+l rf++ l+ +sa+fdslea
Thhalv10028622m 288 -CKLDTDAFSASSLKLVRGEAVIINCMLHLPRFSHQTPNSLI---SFLTEAKTLNPKLVTLVHEEVCLmGNQSYLYRFMDLLHQFSAIFDSLEA 377
.688*****************************977766666...9*******************8887************************* PP
GRAS 274 klpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdr 365
+ +r++vEr+++g++++++++ + e +++W+ +le+ GFkpv +s + +qaklll+ ++ dgyrvee ++ lvlgWk+r
Thhalv10028622m 378 G-----PTRAFVERVFIGPWVSSWLTRIAITaDDVEFECFASWKGWLETNGFKPVDVSFANRCQAKLLLSLFN-DGYRVEELgQNGLVLGWKSR 465
*.....9*****************998776635678899**********************************.******98789999****** PP
GRAS 366 pLvsvSaW 373
+Lvs+S+W
Thhalv10028622m 466 RLVSASFW 473
******** PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MNYPYDDFLD LFFSNNKAAT ASTSSCVEQN DGSLDMDWDV DFRDLIESMM SDEGAPTESP 60
PTIPCDHGQE GICNSASTGF SVADGVDDAE EPNPDESKGL RLVHLLVAAA EASTGLDKTR 120
ELTRVILARL KELVSPSDRT NMERLADHFT DGLSKLLERA NVQRHSSPHQ HRDVHHQVDV 180
LSAIQMLQNM SPYVNFGYFT ASQAILEAVK YERRIHILDY DITEGVQWAS LMQALVCKNT 240
GPLTQHLRIT ALSRATNGKK SIAAVQEAGR RLTAFAESIG QPFSYHHCKL DTDAFSASSL 300
KLVRGEAVII NCMLHLPRFS HQTPNSLISF LTEAKTLNPK LVTLVHEEVC LMGNQSYLYR 360
FMDLLHQFSA IFDSLEAGPT RAFVERVFIG PWVSSWLTRI AITADDVEFE CFASWKGWLE 420
TNGFKPVDVS FANRCQAKLL LSLFNDGYRV EELGQNGLVL GWKSRRLVSA SFWASRDSSN 480
Q*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
