PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp2g01540
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family ERF
Protein Properties Length: 202aa    MW: 21625.7 Da    PI: 7.1813
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp2g01540genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-183080156
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               s+y+G+rw+   g+W  eIr+p++   +kr++lg++ t+e+Aa a++ a+++l+ge
  Tp2g01540 30 SKYRGIRWRG--GKWITEIRVPKK---NKRIWLGTYPTPEMAATAYDVAALALKGE 80
               89******86..*********976...4*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.15E-193089IPR016177DNA-binding domain
CDDcd000181.77E-273089No hitNo description
PfamPF008472.2E-113080IPR001471AP2/ERF domain
SMARTSM003806.2E-273193IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-253188IPR001471AP2/ERF domain
PROSITE profilePS5103220.0473187IPR001471AP2/ERF domain
PRINTSPR003671.7E-63243IPR001471AP2/ERF domain
PRINTSPR003671.7E-66989IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MPSRSYPCVS SSTTITTANN TLVSSGSAIS KYRGIRWRGG KWITEIRVPK KNKRIWLGTY  60
PTPEMAATAY DVAALALKGE EAALNFPSSV PSYPLPCSNS ETHIRKAAAT AAAAAAPVAV  120
AAAAVVVVKT AKNMNGGEKN KEGVCDVVGY STNEFVDEEE LFNMPNLLVY MARGMMVAPP  180
WIDSLSLDDS PEISIGESLW SY
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp2g01540
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018454835.16e-58PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9CAN93e-48ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A087HEJ53e-55A0A087HEJ5_ARAAL; Uncharacterized protein
STRINGA0A087HEJ55e-56(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19572777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.16e-31ERF family protein