PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Tp2g24150

Organism

Thellungiella parvula

Taxonomic ID

98039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella

Family

bZIP

Protein Properties

Length: 192aa MW: 22235 Da PI: 7.8002

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Tp2g24150	genome	thellungiella	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.1	4.6e-14	75	134	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r+rr+ +NRe+ArrsR RKk++ieeL++ v++L N+ L +++ +l + + +e+ Tp2g24150 75 ERRARRMVSNRESARRSRMRKKKQIEELQQQVEQLMMLNHNLSEKVINLLESNHQILQEN 134 689******************************************999999988888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.5E-14	72	136	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.392	74	137	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.3E-13	75	134	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.44E-11	76	128	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.9E-11	76	132	No hit	No description
CDD	cd14702	6.54E-16	77	128	No hit	No description
PROSITE pattern	PS00036	0	79	94	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence Send to blast
MEPGVHRSHH CFDILEGMPP QDDHFNSAFL PNANFHVQLQ SVSPNLSTRS NNNNRSHLDS 60 NGENICHSEG LLPEERRARR MVSNRESARR SRMRKKKQIE ELQQQVEQLM MLNHNLSEKV 120 INLLESNHQI LQENSQLKEK VSSVNLFMAE MLIPMRNVDG SNNDRNVNHP RGETSNRTNA 180 FLARITMIDP YM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Tp2g24150

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009111959.1	1e-104	PREDICTED: basic leucine zipper 43-like
Refseq	XP_013659178.2	1e-104	basic leucine zipper 43-like
TrEMBL	A0A3P5XVL5	1e-103	A0A3P5XVL5_BRACM; Uncharacterized protein
STRING	Bra035957.1-P	1e-104	(Brassica rapa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6185	25	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	3e-71	basic leucine-zipper 70