PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp2g28180
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family EIL
Protein Properties Length: 552aa    MW: 63259.1 Da    PI: 4.4422
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp2g28180genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3439.82.4e-134354391354
                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksn....ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 
                ++lkkrmwkd++l+ +lk++kk+       +     t+a++s+    ++ e++ rkkm+r+QD++LkYM+k+mevc+aqGfvYgi+pekgkpv+g+sdsL
  Tp2g28180  35 DDLKKRMWKDRNLMFKLKQQKKDDHDLSVLSsppssTSASSSSsavvRRAEASLRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSL 134
                79********************9764443335555545544448999***************************************************** PP

                XXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.-- CS
       EIN3  92 raWWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.ls 187
                r WWke+v+fd+++p+a+++y   +a++l++s+es +   ++s+ h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPWWP+G+elwwge+g ++
  Tp2g28180 135 RLWWKENVQFDQTAPNAVTDYltlAAAQLMSSNESLD---PNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPWWPNGTELWWGEQGaAA 231
                **********************999999998877766...9********************************************************999 PP

                TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXXXXXXXXXXX CS
       EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqspkvtlsceqkedve 285
                 + g+ppy+kphdl+kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake++++++vlnqee+ +++++ +   ++ ++++p+ ++s +q+   +
  Tp2g28180 232 FEYGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVRRLARQSKCLQDKMMAKETDTWSRVLNQEEARLKRLKISddEEEEEDHEPARFISLDQESSLN 331
                9**********************************************************************99999544466669999999999888777 PP

                ......XXXXXX.XXXXXXXXXX....................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXX CS
       EIN3 286 ......gkkeskikhvqavktta....................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelif 343
                      + +++  +  + +k+ +                                    ++++ +krk  ++e++++ s+  ++tcq+s++++s+ +l+f
  Tp2g28180 332 dcffvaQ-DQELARLTRRDKRVDqgsslnacflvaqdqepvqrvdkksslndcfladqdQEQLGNKRKGDFVEQEAMLSN--VYTCQNSSCPSSDASLGF 428
                7999632.3333244444444448999***************************************************99..7***************** PP

                XXXXXXXXXXX CS
       EIN3 344 adknsisqney 354
                 dkn ++ +e+
  Tp2g28180 429 LDKNLRTGHEM 439
                *******9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.1E-12235298No hitNo description
Gene3DG3DSA:1.10.3180.102.8E-67174305IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.45E-58176301IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    Send to blast
MVEVQDLEPL SPIQDDEDDD YEDEFDRFGE DISYDDLKKR MWKDRNLMFK LKQQKKDDHD  60
LSVLSSPPSS TSASSSSSAV VRRAEASLRK KMARSQDSVL KYMMKIMEVC KAQGFVYGIV  120
PEKGKPVTGS SDSLRLWWKE NVQFDQTAPN AVTDYLTLAA AQLMSSNESL DPNSYIHMLH  180
ELQDTTLGSL LSALMQHCVP PQRRFPLEKG LAPPWWPNGT ELWWGEQGAA AFEYGPPPYR  240
KPHDLRKAWK VSVLAAVIKH MSPNLERVRR LARQSKCLQD KMMAKETDTW SRVLNQEEAR  300
LKRLKISDDE EEEEDHEPAR FISLDQESSL NDCFFVAQDQ ELARLTRRDK RVDQGSSLNA  360
CFLVAQDQEP VQRVDKKSSL NDCFLADQDQ EQLGNKRKGD FVEQEAMLSN VYTCQNSSCP  420
SSDASLGFLD KNLRTGHEME CLHGTQEPIN QSSGGSDGFV WSMTTSDDDY SASSKAKDTR  480
DYQNQDENWL DYPWFERLHD LNFSDQGFED QTTVVDLNQL PDHSDSNQTM NEEDFSLWDM  540
GCEDKDIYMS QD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-561743041130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-561743041130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp2g28180
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006281975.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ50.0EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLR0GUK90.0R0GUK9_9BRAS; Uncharacterized protein
STRINGXP_006281975.10.0(Capsella rubella)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.10.0EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]