PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp2g28950
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bZIP
Protein Properties Length: 204aa    MW: 23894.2 Da    PI: 9.6534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp2g28950genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59e-1186147263
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                k+ +r +rk +NRe+ArrsR +K++ ++  +    +L +eN++L ++l     ++++ k+e+
  Tp2g28950  86 KDERRKKRKKSNRESARRSRMKKQKHLDDVRSQLNQLNTENQELENRLRYVMHHCQRAKMEN 147
                7789*****************************************************99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-1084143No hitNo description
SMARTSM003382.2E-1385149IPR004827Basic-leucine zipper domain
PfamPF001702.4E-886147IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.95587150IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.0E-989140No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
CDDcd147022.06E-1596141No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MSSFFPVFSS EPVLVNHVPA LETGFTPWDD ASDLFSIFDS PVCPLEVNPG LEKTNSCQIQ  60
NKSYPNLGLE NKRFNQTSLN VFLPDKDERR KKRKKSNRES ARRSRMKKQK HLDDVRSQLN  120
QLNTENQELE NRLRYVMHHC QRAKMENDRL RLEHHILHEK LLNLRQALML RQIHQNSTCA  180
TWSCVNSTVV TVHHNPSVMR DHVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18894RRKKRKK
288109RRKKRKKSNRESARRSRMKKQK
39094KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp2g28950
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010463712.11e-102PREDICTED: basic leucine zipper 43-like
TrEMBLA0A078HJJ01e-111A0A078HJJ0_BRANA; BnaAnng05020D protein
TrEMBLA0A398AJZ81e-111A0A398AJZ8_BRACM; Uncharacterized protein
STRINGXP_010463712.11e-102(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.15e-25basic leucine-zipper 5