PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp3g27500
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family ERF
Protein Properties Length: 89aa    MW: 9952.3 Da    PI: 5.0818
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp3g27500genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.63.1e-133278756
        AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +w+  +g+W AeI+dp   g r r +lg+f   e+Aa+a+++a+ +l ge
  Tp3g27500 32 CWCFVSGKWSAEIWDP---GLRVRRWLGTFPKMEMAARAYDEAAASLTGE 78
               577779*********9...556999*********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.9232286IPR001471AP2/ERF domain
PfamPF008471.6E-63378IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-123680IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.9E-163779IPR001471AP2/ERF domain
SMARTSM003802.0E-93787IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MVFAGPGWKA GKSKPGEMGD WFITGVQCQE RCWCFVSGKW SAEIWDPGLR VRRWLGTFPK  60
MEMAARAYDE AAASLTGEYQ REVAVSGDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp3g27500
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020871492.12e-14ethylene-responsive transcription factor ERF122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20350.12e-11ERF family protein