PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp3g31180
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bZIP
Protein Properties Length: 208aa    MW: 23984 Da    PI: 10.1075
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp3g31180genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.6e-11137188554
                CHHHCHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKka..eieeLeekvkeLeaeNkaLkkeleelkk 54 
                +r +r++kNRe+A rsR+RK++  ++ eLe +++ L++eN +Lk + e+lk 
  Tp3g31180 137 RRHKRMIKNRESAARSRARKQEcaYTNELELEIAHLQKENARLKRQEEQLKM 188
                799******************5559*******************99999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-10128188No hitNo description
SMARTSM003383.9E-6133195IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.691135187IPR004827Basic-leucine zipper domain
CDDcd147079.64E-23137193No hitNo description
PfamPF001702.4E-9137188IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.86E-8137187No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MLSSAKHKIN HSAFTNSSSA TSLSHLHSQA KNMTQVTMEE VWKEINLASL HQHRQLNIDH  60
EPMLRNQNPN NSIFKDFLNM PLNQEPPPSS SSLPLPPPAT VLCLNPYSIT THFDESARYT  120
CFGKKRGQDS DESRGERRHK RMIKNRESAA RSRARKQECA YTNELELEIA HLQKENARLK  180
RQEEQLKMAE ATQHQTKKTL QRSWTAPF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:23543784}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp3g31180
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006409247.21e-123bZIP transcription factor 27
SwissprotQ7PCC64e-91FDP_ARATH; bZIP transcription factor 27
TrEMBLV4LJI61e-118V4LJI6_EUTSA; Uncharacterized protein (Fragment)
STRINGXP_006409247.11e-119(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.25e-81basic region/leucine zipper motif 27
Publications ? help Back to Top
  1. Jang S,Li HY,Kuo ML
    Ectopic expression of Arabidopsis FD and FD PARALOGUE in rice results in dwarfism with size reduction of spikelets.
    Sci Rep, 2017. 7: p. 44477
    [PMID:28290557]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]