PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA19396
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 141aa    MW: 16333.1 Da    PI: 8.0078
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA19396genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.41.4e-08118139122
                                ---SS-EEEEEEE--TT-SS-E CS
                       WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                +dDgy+WrKYG+K vk++ + r
  Tp57577_TGAC_v2_mRNA19396 118 MDDGYKWRKYGKKIVKNNLNLR 139
                                69***************97755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-10105139IPR003657WRKY domain
SuperFamilySSF1182905.36E-8110139IPR003657WRKY domain
PROSITE profilePS5081111.187113140IPR003657WRKY domain
PfamPF031062.8E-5119139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MDYYFVNSHA TTNFAQSTHH HHHMIPNSSS HEFMQQLSDY LMFDDIHHDQ ESRTQSIESL  60
EKVTSQSTNE SLEKVTFSDA SQGFNDATSK SNNIQKKGIK REVGPKIAFR TKSEIEIMDD  120
GYKWRKYGKK IVKNNLNLRY *
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA19396
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003630118.16e-52probable WRKY transcription factor 51
TrEMBLA0A072TVK63e-51A0A072TVK6_MEDTR; WRKY family transcription factor
STRINGAET045942e-51(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.16e-17WRKY DNA-binding protein 51