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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA19794 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
ERF |
| Protein Properties |
Length: 205aa MW: 23233.1 Da PI: 8.7899 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA19794 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 58.4 | 1.8e-18 | 112 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdps+ g r++lg+f+ + +Aaka++ a+ +++g
Tp57577_TGAC_v2_mRNA19794 112 RYRGVRRRP-WGKFAAEIRDPSKKG--SRVWLGTFDCEIDAAKAYDSAAFRMRG 162
7********.**********97744..**********99*************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MTTAKETSNL DLIRHHLLGD NISVKLENPS PEFDLYSYIS ENTNFFTFLE GYDLVADMEF 60
FGNTSQTETK PSKEIKKTNS PEPKPKLEPI STTMVSSKKI KKEEEFVDET RRYRGVRRRP 120
WGKFAAEIRD PSKKGSRVWL GTFDCEIDAA KAYDSAAFRM RGQKAILNFP LEAGECDPKP 180
NSCGRKRRRE SDQVEASRSS TSSS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and in leaves. Also strongly induced by cycloheximide, mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT052681 | 1e-130 | BT052681.1 Medicago truncatula clone MTYFD_FE_FF_FG1G-N-16 unknown mRNA. |
| GenBank | BT134077 | 1e-130 | BT134077.1 Medicago truncatula clone JCVI-FLMt-11I4 unknown mRNA. |
| GenBank | BT139900 | 1e-130 | BT139900.1 Medicago truncatula clone JCVI-FLMt-11G6 unknown mRNA. |
| GenBank | CU682349 | 1e-130 | CU682349.14 M.truncatula DNA sequence from clone MTH2-90A5 on chromosome 1, complete sequence. |
| GenBank | JF357924 | 1e-130 | JF357924.1 Medicago truncatula ethylene response factor (SERF1) mRNA, complete cds. |
