PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA20164
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 186aa    MW: 21459.3 Da    PI: 10.4303
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA20164genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.84.2e-07121144528
                                CHHHCHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaei 28 
                                +r  r +kNRe+A+rsR+RK+++i
  Tp57577_TGAC_v2_mRNA20164 121 RRNNRIMKNRESATRSRARKQESI 144
                                578899****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0068117179IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-9119177No hitNo description
CDDcd147071.40E-13121178No hitNo description
PROSITE patternPS000360125139IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
LSPSTSAITR ISTTRFLTNN TFIFNPFLNT PPPNPKKHQQ KTMEDVWKDI NLPSLNNNMN  60
TPVSSPSLKT PTSLHSSINL NSLPEFYFDP LEHKNLQLEQ SHHHTSTLSN VEDILSNTIE  120
RRNNRIMKNR ESATRSRARK QESIASNIIF LYSAYIFELK KKVKSLEEEN ARLKRQNHVC  180
FIHFL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA20164
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024629057.11e-66protein FD
TrEMBLA0A2Z6NW521e-70A0A2Z6NW52_TRISU; Uncharacterized protein (Fragment)
STRINGAET037364e-68(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1699577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-07ABA-responsive element binding protein 3