PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA31455
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 313aa    MW: 35030.4 Da    PI: 8.1307
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA31455genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.8e-10244286547
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                                +r++r++kNRe+A rsR++K++ i +L e  + L++ N +Lk 
  Tp57577_TGAC_v2_mRNA31455 244 RRQKRMAKNRESAARSRAKKQEHINKLHEDRDRLQKINIELKM 286
                                69************************************88763 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-6240299IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.059242287IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.22E-8244289No hitNo description
PfamPF001701.3E-7244286IPR004827Basic-leucine zipper domain
CDDcd147076.38E-15244289No hitNo description
Gene3DG3DSA:1.20.5.1705.2E-10244287No hitNo description
PROSITE patternPS000360247262IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MNFDDLLKNV ISAESDQLMQ NPSSYAKNVI SDDSNSNSNN NSFFIGSTSG NNLNETLCNK  60
TFNGVWSEIN HQKHAIGGSM KDHNNLQQSI LGETAFEDFL THAKAFNMGN QDSGHVIGDA  120
NQVPFIGIES KLVMASQPEH WLPFQMPIPI QMQHQEHQNR QIIDICQDFN VAKPVYENQV  180
MDIGYSENSL AMSMPIGATT MSFPSTCSDS KGVVVAAAAG GGGGVGVGRK HKYSDEMMEK  240
TIERRQKRMA KNRESAARSR AKKQEHINKL HEDRDRLQKI NIELKMKKKI DEWLLPNLTP  300
RYQLRRTSSA KF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA31455
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003614899.23e-84ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLA0A2K3L3B01e-136A0A2K3L3B0_TRIPR; Abscisic acid-insensitive 5-like protein
STRINGAES978573e-96(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-19ABA-responsive element binding protein 3