PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA33783
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 147aa    MW: 17050.1 Da    PI: 8.9664
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA33783genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.93.9e-114081146
                        AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaa 46
                               s ykGVr+++ +g ++AeI+d +     + kr +lg+f  +e Aa a+
  Tp57577_TGAC_v2_mRNA33783 40 SEYKGVRRRS-WGTFAAEIHDpF-----TkKRLWLGSFEREELAAVAY 81
                               569****887.**********66.....34**********99999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.76E-164081No hitNo description
SuperFamilySSF541718.5E-134089IPR016177DNA-binding domain
PfamPF008471.1E-44181IPR001471AP2/ERF domain
PROSITE profilePS5103216.76641106IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-174194IPR001471AP2/ERF domain
SMARTSM003803.5E-941102IPR001471AP2/ERF domain
PRINTSPR003671.7E-64253IPR001471AP2/ERF domain
PRINTSPR003671.7E-66480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MVKRNSTKEK EKVPNTKIVH INGTVEKVYL KNHGKKTFTS EYKGVRRRSW GTFAAEIHDP  60
FTKKRLWLGS FEREELAAVA YSQKFDEFQR KKAEFASRED MDLNQPCKEH HYNYDEPPSD  120
DDNFGGNSNQ MNLGVQGMQE IQPLIH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA33783
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3M5J81e-107A0A2K3M5J8_TRIPR; Ap2/erf domain-containing transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.19e-18ERF family protein