PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA4610
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 318aa    MW: 35932.4 Da    PI: 8.8036
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA4610genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.9e-12235284554
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                               +r+rr+ kNRe+A rsR+R++a++ eLe +   L++eN++Lk+ l e + 
  Tp57577_TGAC_v2_mRNA4610 235 RRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQVLAEAER 284
                               69****************************************77766554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-9231293IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.151233285IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.7E-13234287No hitNo description
SuperFamilySSF579591.19E-9235284No hitNo description
PfamPF001703.0E-10235287IPR004827Basic-leucine zipper domain
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010152Biological Processpollen maturation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MALQVQHLDQ EVQLQEQEEA TIAQPSKQNS ILSLTIDEFQ CKRGKSFGSL NMDEFIASIW  60
SSNDEDTTTQ TQKNTKNVAT TEQTISQDGN SFSVPTPICK KTVDEVWSEI HKNTPQFKEE  120
NNLQRNETLM KQQTLGELTL EDFLVKAGVV QQSSSYPFQT HSGNVLRNVT PVNLASYGLM  180
PSMGMGFSTQ CVSSNGLATY QMLSQNNNLG VQDQVGESSN RKRIINGPPD VVVERRQRRM  240
LKNRESAARS RARRQAYTVE LEAELNLLKE ENEKLKQVLA EAERKRKQEL LHRNHPTKGQ  300
KGTEKLRAIR RPISAIW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA4610
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003596807.11e-165ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLA0A2K3PEK40.0A0A2K3PEK4_TRIPR; Abscisic acid-insensitive 5-like protein
STRINGAES670581e-165(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.11e-56bZIP family protein