PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Tp57577_TGAC_v2_mRNA657

Organism

Trifolium pratense

Taxonomic ID

57577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium

Family

G2-like

Protein Properties

Length: 153aa MW: 17231.4 Da PI: 6.6743

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Tp57577_TGAC_v2_mRNA657	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.4	1.3e-12	1	29	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk+i +lm+v gLt ++v+SHLQk Rl Tp57577_TGAC_v2_mRNA657 1 ATPKHIIKLMNVRGLTQSKVASHLQKVRL 29 9*************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-10	1	32	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.3E-9	1	29	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence Send to blast
ATPKHIIKLM NVRGLTQSKV ASHLQKVRLG LKGKKTKLKK ELSKSGKQNQ YHVPNNESLE 60 VVQSMPMPEH NESVEVVQSM PAAQQDQNVV LNSANIQCDY NIPAQAQQHE NVFDDFDISK 120 LFTNETNMMV DGSSYLYDEA WNSSEYGTFN WC*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Tp57577_TGAC_v2_mRNA657

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z6LGU9	7e-42	A0A2Z6LGU9_TRISU; Uncharacterized protein

Link Out ? help Back to Top
Phytozome	Tp57577_TGAC_v2_mRNA657