PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Tp57577_TGAC_v2_mRNA8858

Organism

Trifolium pratense

Taxonomic ID

57577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium

Family

bZIP

Protein Properties

Length: 197aa MW: 22665.9 Da PI: 6.1314

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Tp57577_TGAC_v2_mRNA8858	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.2	1.3e-06	72	92	17	37
HHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvke 37 Arr+R+RKk+++ +Le kvke Tp57577_TGAC_v2_mRNA8858 72 ARRYRLRKKMYLTNLESKVKE 92 9******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence Send to blast
MDGKMDQGIY ITSSFSNIGP TSDAARDVNI GSNSIAEQAE IWAASRAKSG LNCDLNMDPK 60 KARRIMLKSL EARRYRLRKK MYLTNLESKV KETQVQIAYD LQPKIELELD QKSSLMLEQE 120 MLIHRINILE KEMLLKSALT KDLLDQLNML NELYTKQQEQ QTQMWNDSNV HPISYNPLSH 180 DYSNYHDQGE NMLPLL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	78	RRYRLRK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Tp57577_TGAC_v2_mRNA8858

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004500440.1	1e-43	uncharacterized protein LOC101503209
TrEMBL	A0A072UZ57	5e-57	A0A072UZ57_MEDTR; Uncharacterized protein
STRING	XP_004500440.1	4e-43	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18156	3	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	2e-09	bZIP family protein

Link Out ? help Back to Top
Phytozome	Tp57577_TGAC_v2_mRNA8858