PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp6g33280
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family EIL
Protein Properties Length: 442aa    MW: 50607.8 Da    PI: 5.3922
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp6g33280genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3389.16.4e-119212701258
                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekve 100
                ++lk+rmwkd++l+++ k++k+++ +     ++   + +  e++rrkkm+r+QD++LkYM+k+m vc+a+GfvYgi+pekgkpv+g+sdsLr+WWke+v+
  Tp6g33280  21 DDLKRRMWKDRNLMEKFKRQKRHNSGV----VSL--TTHQAEASRRKKMARSQDSVLKYMMKIMDVCKAKGFVYGIVPEKGKPVSGSSDSLRRWWKEDVQ 114
                79********************96533....333..34679*********************************************************** PP

                XXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG CS
       EIN3 101 fdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphd 200
                fd+n p+ais+y a  l+++ ++  + e+ss  h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPWWPtG+elwwge+g+++++g ppy+kphd
  Tp6g33280 115 FDQNVPNAISDYLA--LAAAAAELIEKEPSSLLHMLQELQDTTLGSLLSALMQHCVPPQRRFPLEKGIAPPWWPTGTELWWGEQGAAHEHGVPPYRKPHD 212
                ************43..4444455557799*********************************************************************** PP

                --HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S- CS
       EIN3 201 lkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekeca 258
                l+k wkvsvL+a ikhmsp++ ++r+l+rqsk+lqdkm++ke++++++vlnqee++++
  Tp6g33280 213 LRKSWKVSVLAALIKHMSPNLGRVRRLARQSKCLQDKMMSKETDTWSRVLNQEEALLN 270
                ******************************************************9864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.0E-11721266No hitNo description
Gene3DG3DSA:1.10.3180.101.3E-66142270IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.28E-58145269IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MVEVEELEAV EDGEEETISY DDLKRRMWKD RNLMEKFKRQ KRHNSGVVSL TTHQAEASRR  60
KKMARSQDSV LKYMMKIMDV CKAKGFVYGI VPEKGKPVSG SSDSLRRWWK EDVQFDQNVP  120
NAISDYLALA AAAAELIEKE PSSLLHMLQE LQDTTLGSLL SALMQHCVPP QRRFPLEKGI  180
APPWWPTGTE LWWGEQGAAH EHGVPPYRKP HDLRKSWKVS VLAALIKHMS PNLGRVRRLA  240
RQSKCLQDKM MSKETDTWSR VLNQEEALLN IKDLKISEDQ ETSGAKTKRK GDFMEPSKSD  300
YTCQNSSCPK SDASFGFMDK NSRTGHEIQC LYGSSSPSTG DTISALETAP SIGTNMTSED  360
DYSVSSSAMR NRDDDDHSNW MDYLWLERMQ HEFNCSRRFD DDDTAMDLNQ FPESNQSDNV  420
NQSTFSVWDM GCEDKDIYMF DY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-571462684126Protein ETHYLENE INSENSITIVE 3
4zds_B1e-571462684126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp6g33280
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2400890.0AC240089.1 Brassica oleracea clone BOT01-64A15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018469634.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX160.0EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A078HTL30.0A0A078HTL3_BRANA; BnaC02g00520D protein
TrEMBLA0A0D3AID80.0A0A0D3AID8_BRAOL; Uncharacterized protein
STRINGBo2g009710.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.10.0EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]