PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp6g35750
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bZIP
Protein Properties Length: 149aa    MW: 17477.3 Da    PI: 10.2627
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp6g35750genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.9e-095296549
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
               k+ +r  +NR+AA++sR +K++  +eL +k+ eL    + L++++
  Tp6g35750 52 KKLKRIVSNRVAAQKSRWKKLQHADELVKKSMELHRHVSVLRSQV 96
               8999******************************99888888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.6E-945108No hitNo description
SMARTSM003381.4E-648112IPR004827Basic-leucine zipper domain
PfamPF077161.3E-85097IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.61150113IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.76E-852102No hitNo description
PROSITE patternPS0003605570IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MSEPSFPVPT SFRMSKSGSQ EEEKKSGYIN YEVEPGLTIR LRQNIDPAMD PKKLKRIVSN  60
RVAAQKSRWK KLQHADELVK KSMELHRHVS VLRSQVVMAI EQKRCLESEQ RELKESMSAW  120
LQYFISTQGE IEVYRAELER LKKKMAHMI
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp6g35750
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006399196.13e-84basic leucine zipper 6
TrEMBLV4LAH97e-83V4LAH9_EUTSA; Uncharacterized protein
STRINGXP_006399196.11e-83(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144181821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07160.16e-57bZIP family protein