PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g34440
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family BES1
Protein Properties Length: 302aa    MW: 33087.9 Da    PI: 7.582
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g34440genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822192.31.7e-59713712145
     DUF822  12 rEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesys 111
                rE+ + RERrRRai+akiy+GLRaqGnyklpk++DnneVlkALc eAGwvvedDGttyrkg+kp  ++e+ g+ ++ s++ss+q s++ssa++sp++sy+
  Tp7g34440   7 RERERERERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWVVEDDGTTYRKGFKPS-ASEISGTPTNLSTSSSIQPSPQSSAFPSPAPSYH 105
                788899**********************************************************9.********************************** PP

     DUF822 112 aspksssfpspssldsislasaasllpvlsvlsl 145
                 sp sssfpsps++d +s++    llp+l++ ++
  Tp7g34440 106 GSPVSSSFPSPSRYDGNSSS--YLLLPFLHNIAS 137
                ****************9776..899999998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.9E-557121IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MTDKDLRERE RERERRRRAI TAKIYSGLRA QGNYKLPKHC DNNEVLKALC LEAGWVVEDD  60
GTTYRKGFKP SASEISGTPT NLSTSSSIQP SPQSSAFPSP APSYHGSPVS SSFPSPSRYD  120
GNSSSYLLLP FLHNIASSIP ANLPPLRISN SAPVTPPLSS PTSRGSKRKL MTEQLPNGGS  180
LHALRHPLFA ISAPSSPTRR AGHQTPPTIP ECDESEEDSI EDSGRWINFQ STAPTSPTFN  240
LVKQSSMVID MKRSDWGMSG MNVRGSEFEF ENGTVKPWEG EMIHEVGVED LELTLGGNKT  300
RC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-261978391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-261978391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-261978391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-261978391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1616RERERERERRR
2817RERERERRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00474DAPTransfer from AT4G36780Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp7g34440
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0503940.0AY050394.1 Arabidopsis thaliana AT4g36780/C7A10_580 mRNA, complete cds.
GenBankAY0973570.0AY097357.1 Arabidopsis thaliana AT4g36780/C7A10_580 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006411962.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A430.0BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A178V2S60.0A0A178V2S6_ARATH; BEH2
STRINGXP_006411962.11e-180(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM115122333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.11e-88BES1/BZR1 homolog 2