PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g35380
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bZIP
Protein Properties Length: 252aa    MW: 29273.7 Da    PI: 6.8781
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g35380genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.56.2e-13140187552
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                ++ +r+++NRe+ArrsR RK+  i++L++ v +L+ eN++L ++l   
  Tp7g35380 140 RKRKRMESNRESARRSRMRKQCHIDNLRNQVNQLDMENRELGNRLRLV 187
                67899***********************************99777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-11130193No hitNo description
SMARTSM003382.5E-14136200IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887138201IPR004827Basic-leucine zipper domain
PfamPF001708.4E-10140185IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11140191No hitNo description
CDDcd147024.65E-19141192No hitNo description
PROSITE patternPS000360143158IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MLSTIPAFSL SEPGLVNHFS GFHTGFTSWD WDCSDLFSVN KLSSEPAVPS PCYGESDSGL  60
VRINSGFDDI KTGSDESYDG FIKTKPAFDD GDSSLGVPCP QTDKPNSDDP KRWTAIENFD  120
SGEQNHNRNK LIQPEMTDER KRKRMESNRE SARRSRMRKQ CHIDNLRNQV NQLDMENREL  180
GNRLRLVIHQ LQRVSTDNNR LVTEQEILRL RLSEMRRILI LRQLQQQQQW ELNNRRIFMT  240
EQNPSSIIHH MI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152159RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp7g35380
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022572841.11e-141basic leucine zipper 63-like
TrEMBLA0A3N6RPC91e-144A0A3N6RPC9_BRACR; Uncharacterized protein
STRINGBo7g118720.11e-139(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78551840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.11e-127basic leucine-zipper 7