PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g36940
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bZIP
Protein Properties Length: 530aa    MW: 58609 Da    PI: 7.5327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g36940genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.2e-10384442563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                kr +r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l++++
  Tp7g36940 384 KRVKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQLTLLQRDMMGLTNQN 442
                899******************************************99998877777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-19380444IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.76382445IPR004827Basic-leucine zipper domain
PfamPF001701.2E-8384441IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11384441No hitNo description
SuperFamilySSF579591.53E-11384440No hitNo description
CDDcd147038.76E-24385434No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MGDTEKCNTD MIQRLHSSFG TSSCSIPKQP ISQLELNPNF IHSQFSSMPF SDSGKRIGVP  60
PSHPNLIPLY SQIPTTRPQP GPQNFNPGPS HSRSMSQPSS FFSFDSLPPL SPSPFRDHDV  120
SMEDRDSGGF NNNNNNASSL LPPSPFTRCN STSSRVVGES LPPRKSHRRS NSDIPSGFNS  180
IPPRPLERSI SGGECADWSK ATPLVKKESS CEREGVGERE AMDDLFSAYM NLENIDVLNS  240
SEADDSKNGI QNRDDMESSR ASGTKTNGSD TEGESSSVNE SGNQKRESVK RRAGEGDIAP  300
TSRHFRSVSV DSCFMDKLSF GQESLKPPPS PGTMSRKVSP TNSVDGNSGL GFSIEFKNGE  360
FTAAEMKKIM ANDKLAEMAM SDPKRVKRIL ANRQSAARSK ERKMRYIVEL EHKVQTLQTE  420
ATTLSAQLTL LQRDMMGLTN QNNELKFRLQ AMEQQARLRD ALNEALNGEV QRLKLAIGET  480
SHNESDRSKM QSLNAEMFQQ LNISQFRQQP QCQSQQKQNG TNSTKPESNE
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp7g36940
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0808390.0AY080839.1 Arabidopsis thaliana unknown protein (At4g38900) mRNA, complete cds.
GenBankAY1504350.0AY150435.1 Arabidopsis thaliana unknown protein (At4g38900) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001031810.10.0Basic-leucine zipper (bZIP) transcription factor family protein
RefseqNP_849520.10.0Basic-leucine zipper (bZIP) transcription factor family protein
TrEMBLA0A178UWI20.0A0A178UWI2_ARATH; Uncharacterized protein
TrEMBLQ8H1F00.0Q8H1F0_ARATH; Basic-leucine zipper (BZIP) transcription factor family protein
STRINGAT4G38900.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM42242757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.30.0bZIP family protein