PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_1AL_9ADA7A031.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 220aa MW: 23096.5 Da PI: 7.5458

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_1AL_9ADA7A031.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	132	189	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYG+K vk+s++pr+YYrC+++gC+vkk+ver+++dp +v++tYeg+H h Traes_1AL_9ADA7A031.1 132 LDDGYKWRKYGKKAVKNSPNPRNYYRCSTEGCSVKKRVERDRDDPAYVVTTYEGTHSH 189 59*******************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.5E-33	118	192	IPR003657	WRKY domain
SuperFamily	SSF118290	1.18E-27	124	192	IPR003657	WRKY domain
PROSITE profile	PS50811	31.25	127	192	IPR003657	WRKY domain
SMART	SM00774	3.2E-34	132	191	IPR003657	WRKY domain
Pfam	PF03106	2.0E-24	133	189	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009867	Biological Process	jasmonic acid mediated signaling pathway
GO:0042742	Biological Process	defense response to bacterium
GO:0050832	Biological Process	defense response to fungus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence Send to blast
MAAVGAAPLL YQQQAQAAGD GCYFSSMSSH FSHGGISSTS SSPASSFSAA LGATPPAAPA 60 IAADPAAQFD ISEYLYDEGT FAAPLPPVVS VPAVGAAAAS SASAVTARSA ESAERPRTER 120 IAFRTRSEVE ILDDGYKWRK YGKKAVKNSP NPRNYYRCST EGCSVKKRVE RDRDDPAYVV 180 TTYEGTHSHV SPSTVYYASQ DAASGRFFVA GTHPPPGSLN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wj2_A	5e-26	122	193	7	78	Probable WRKY transcription factor 4
2lex_A	5e-26	122	193	7	78	Probable WRKY transcription factor 4
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269\|PubMed:21030507}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KR827402	0.0	KR827402.1 Triticum aestivum WRKY51 transcriptional factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020192531.1	1e-139	probable WRKY transcription factor 51
Swissprot	Q93WU9	6e-43	WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBL	A0A3B5Y5E9	1e-157	A0A3B5Y5E9_WHEAT; Uncharacterized protein
TrEMBL	A0A446J9T1	1e-157	A0A446J9T1_TRITD; Uncharacterized protein
STRING	Traes_1AL_9ADA7A031.1	1e-158	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP441	37	206

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	1e-40	WRKY DNA-binding protein 50

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Yan C, et al. Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis. Mol. Cell, 2018. 70(1): p. 136-149.e7 [PMID:29625034]