PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1BL_1A885E733.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 234aa    MW: 25276 Da    PI: 8.7782
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1BL_1A885E733.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.2e-10851241251
                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                             NReA r++R++Kka  + Lee+vk+L a N++L+ +l+ 
  Traes_1BL_1A885E733.1  85 GNREAVRKYREKKKAHAAYLEEEVKKLRAANQQLQRRLQG 124
                            5**********************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-874141IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.79576123IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-882124No hitNo description
PfamPF077169.3E-1482129IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-1382142No hitNo description
CDDcd146867.81E-1082132No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MTGWTSRANS SSSTRRCPAP SATSWATPPP RPAPTRTPAT LPARRPPRTP TPACTPTPTS  60
SSPPXXXXXX XXXXXXXXXX XRPLGNREAV RKYREKKKAH AAYLEEEVKK LRAANQQLQR  120
RLQGHATLEA EVVRLRGLLF DVRAKIDAEA AGAFPFQKQC SVGSVACTDP TLCFNNGNSE  180
VGGACWEDSS GPAAADCRFD EDGNGDGNGG ALRDTDAPEQ PARSRDVVEL CFPS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3719681e-147AK371968.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2144D06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020188445.17e-94basic leucine zipper 23-like
TrEMBLA0A3B5Z1Y41e-107A0A3B5Z1Y4_WHEAT; Uncharacterized protein
TrEMBLA0A446K5J31e-107A0A446K5J3_TRITD; Uncharacterized protein
STRINGTraes_1BL_1A885E733.11e-153(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38313675
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.14e-23bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]