PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1BL_736D60ADD.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 108aa    MW: 11941.5 Da    PI: 8.5108
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1BL_736D60ADD.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-16245146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                           rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
  Traes_1BL_736D60ADD.1  2 RGCFSQQEEDHIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 45
                           899*******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.151151IPR017930Myb domain
SuperFamilySSF466891.25E-14159IPR009057Homeodomain-like
SMARTSM007172.5E-13149IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.4E-21151IPR009057Homeodomain-like
PfamPF002491.5E-14245IPR001005SANT/Myb domain
CDDcd001673.23E-11544No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
KRGCFSQQEE DHIVALHQIL GNRWSQIASH LPGRTDNEIK NFWNSCIKKK LRQQGIDPAT  60
HKPMGATATA ALPDAKEEDR KTLSAAVDGS LAPKQQTVFA PFPVCADY
Functional Description ? help Back to Top
Source Description
UniProtPossible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM0669461e-116KM066946.1 Triticum aestivum R2R3-MYB transcription factor (MYB86) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158685.12e-69myb-related protein Hv33-like
SwissprotP200272e-56MYB3_HORVU; Myb-related protein Hv33
TrEMBLA0A3B5Z2T56e-71A0A3B5Z2T5_WHEAT; Uncharacterized protein
TrEMBLA0A446K9K86e-71A0A446K9K8_TRITD; Uncharacterized protein
STRINGTraes_1BL_736D60ADD.11e-76(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23273391
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-32myb domain protein 86
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]