PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1BL_B4AFDB663.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 286aa    MW: 31108.7 Da    PI: 7.003
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1BL_B4AFDB663.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.44.6e-21134195259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                            +Dg++WrKYG K++ ++ fprsYYrC ++   +Cp+kk v+++ ++dp v+ +t  ++H+++
  Traes_1BL_B4AFDB663.1 134 NDGFHWRKYGEKKILNAVFPRSYYRCGYSdehRCPAKKLVQQQnNSDPPVFMVTMINDHTCS 195
                            7**************************998889*******8761579*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-21124195IPR003657WRKY domain
SuperFamilySSF1182901.14E-20127195IPR003657WRKY domain
SMARTSM007741.6E-29133196IPR003657WRKY domain
PROSITE profilePS5081115.296134192IPR003657WRKY domain
PfamPF031062.3E-22134194IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MAMRPKSEMS PPPSDQRDAV IEELRKGAQL ADCLRQQLEL IPELGRRSAA LANVSNISTA  60
LVSSASMLES NREQYSCSSS DPGAAAYAAG ASGSGGGTGA RNGAIARTRK AKHRRGTHGE  120
ELPIREVLTE TPENDGFHWR KYGEKKILNA VFPRSYYRCG YSDEHRCPAK KLVQQQNNSD  180
PPVFMVTMIN DHTCSSLFPA DDQPHSSSNS ATANSQVLDF TKASPSSAAG VWRLKKEEDA  240
GMSVTVPSYT HDELASYSSL PLLSPKEWEM EMEMKSLFSH HSGGGT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177383.11e-164WRKY transcription factor 55-like
TrEMBLA0A3B5Z0Q00.0A0A3B5Z0Q0_WHEAT; Uncharacterized protein
STRINGTraes_1BL_B4AFDB663.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.16e-18WRKY DNA-binding protein 55
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]