PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_1DL_AEBCCB52B.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

VOZ

Protein Properties

Length: 428aa MW: 47285.2 Da PI: 5.2613

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_1DL_AEBCCB52B.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	411.7	1.3e-126	95	312	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 p+ps++lgpkcalwdc rp++gse++qdyc+ +ha lal + gl+gt+pv+rp+gidlkdg+lf+al akvqgk+vgip+cegaat+k Traes_1DL_AEBCCB52B.1 95 PSPSQYLGPKCALWDCGRPVRGSEECQDYCNPYHAGLALSDdGLLGTRPVMRPRGIDLKDGPLFDALCAKVQGKNVGIPVCEGAATSK 182 89***********************************87699**************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyein 175 spwna elfdlsllege++rewlffd+prrafesgnrkqrslpdy+grgwhesrkqvmk+fgglk+syymdpqpss++ewhl+eyein Traes_1DL_AEBCCB52B.1 183 SPWNAHELFDLSLLEGESLREWLFFDRPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKKSYYMDPQPSSNYEWHLFEYEIN 270 ************************************************************************************ PP VOZ 176 eldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ++++lalyrle+k +d k+s+k+k+ ++sl+++q+++++l+a Traes_1DL_AEBCCB52B.1 271 DSNTLALYRLEFKASDPKRSVKSKLGSSSLNEIQQQMVKLSA 312 **************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence Send to blast
MGHGMQGEVA DVANALFSDQ MYYIDHELSI DDFLHGSNPD GLNNLQGTGQ PEHQQFNLPL 60 DLQHSNNSYA DANNSVQSTG DVFFHMSDLL TTVGPSPSQY LGPKCALWDC GRPVRGSEEC 120 QDYCNPYHAG LALSDDGLLG TRPVMRPRGI DLKDGPLFDA LCAKVQGKNV GIPVCEGAAT 180 SKSPWNAHEL FDLSLLEGES LREWLFFDRP RRAFESGNRK QRSLPDYNGR GWHESRKQVM 240 KDFGGLKKSY YMDPQPSSNY EWHLFEYEIN DSNTLALYRL EFKASDPKRS VKSKLGSSSL 300 NEIQQQMVKL SANSPVDNKR GARSKTKASQ KDTNANTYPA LKTTNQAGAS NAYEAVPLNI 360 PNQASAPNAY QTVAPSIPNQ DSTSNAYEDA SQVDPMSYLN ENVVYGPHLP YGYPDGKGDF 420 YWNPSGGA

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence Send to blast

MGHGMQGEVA DVANALFSDQ MYYIDHELSI DDFLHGSNPD GLNNLQGTGQ PEHQQFNLPL  60
DLQHSNNSYA DANNSVQSTG DVFFHMSDLL TTVGPSPSQY LGPKCALWDC GRPVRGSEEC  120
QDYCNPYHAG LALSDDGLLG TRPVMRPRGI DLKDGPLFDA LCAKVQGKNV GIPVCEGAAT  180
SKSPWNAHEL FDLSLLEGES LREWLFFDRP RRAFESGNRK QRSLPDYNGR GWHESRKQVM  240
KDFGGLKKSY YMDPQPSSNY EWHLFEYEIN DSNTLALYRL EFKASDPKRS VKSKLGSSSL  300
NEIQQQMVKL SANSPVDNKR GARSKTKASQ KDTNANTYPA LKTTNQAGAS NAYEAVPLNI  360
PNQASAPNAY QTVAPSIPNQ DSTSNAYEDA SQVDPMSYLN ENVVYGPHLP YGYPDGKGDF  420
YWNPSGGA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK376294	0.0	AK376294.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3120B09.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020158802.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-109	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A3B5ZYN8	0.0	A0A3B5ZYN8_WHEAT; Uncharacterized protein
TrEMBL	A0A452ZJS1	0.0	A0A452ZJS1_AEGTS; Uncharacterized protein
STRING	EMT23555	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-107	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]