PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_1DL_D9BA83221.2

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 368aa MW: 39753.8 Da PI: 6.3231

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_1DL_D9BA83221.2	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48	2.6e-15	256	299	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ Traes_1DL_D9BA83221.2 256 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 299 79***************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-13	252	321	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	254	299	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.0E-13	256	299	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.75E-12	256	302	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.0E-15	256	299	No hit	No description
CDD	cd14707	3.85E-25	256	300	No hit	No description
PROSITE pattern	PS00036	0	259	274	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence Send to blast
MIQAMASQSQ AGGGGGGYAG PGQHGQAQGL ARQGSLYSLT LDEVQSQLTE PLLSMNLDEL 60 LKSVFPDGVD PVGGVAGQSE PALGLHRQGS ITMPPELSKK TVDEVWKGIQ DSPKRSGEEG 120 SQRRRERQPT FGEMTLEDFL VKAGVVAEGH LKDLIDLPAN MGAVGRSVIE AAAPSLNPGA 180 HWLQQYLEPQ HPSMAGPFMA SHLGPQPLSV ATGAIMEPIY PDGQITSPML DALSDPQTPR 240 RKRGASDGVT DKVVERRQKR MIKNRESAAR SRARKQAYTN ELENKVSRLE EENERLKKQK 300 GVGHDDNLRA SPRTQVSTPE NKFCSCLTSI VNFVDYTAHM FSVVVVETVG SLRCCSLSQP 360 GGSEFVDE

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence Send to blast

MIQAMASQSQ AGGGGGGYAG PGQHGQAQGL ARQGSLYSLT LDEVQSQLTE PLLSMNLDEL  60
LKSVFPDGVD PVGGVAGQSE PALGLHRQGS ITMPPELSKK TVDEVWKGIQ DSPKRSGEEG  120
SQRRRERQPT FGEMTLEDFL VKAGVVAEGH LKDLIDLPAN MGAVGRSVIE AAAPSLNPGA  180
HWLQQYLEPQ HPSMAGPFMA SHLGPQPLSV ATGAIMEPIY PDGQITSPML DALSDPQTPR  240
RKRGASDGVT DKVVERRQKR MIKNRESAAR SRARKQAYTN ELENKVSRLE EENERLKKQK  300
GVGHDDNLRA SPRTQVSTPE NKFCSCLTSI VNFVDYTAHM FSVVVVETVG SLRCCSLSQP  360
GGSEFVDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	115	DSPKRS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU307112	0.0	EU307112.2 Triticum aestivum FD-like 2 protein mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020181441.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	4e-67	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A287E8D8	0.0	A0A287E8D8_HORVV; Uncharacterized protein
STRING	Traes_1DL_D9BA83221.2	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-62	ABA-responsive element binding protein 3

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]