PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_1DL_DA67871B9.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 72aa MW: 8695.65 Da PI: 5.251

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_1DL_DA67871B9.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.1	1.1e-09	1	43	14	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 Re+A rsR+RK+a+i+eLe v +Le+e +L e ee +++ Traes_1DL_DA67871B9.1 1 RESAARSRERKQAYIAELEAQVTQLEEEHAELLREQEEQNEKR 43 9****************************99877766555443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57959	3.75E-8	1	41	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.7E-9	1	50	No hit	No description
Pfam	PF00170	2.9E-8	1	50	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.967	1	54	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 72 aa Download sequence Send to blast
RESAARSRER KQAYIAELEA QVTQLEEEHA ELLREQEEQN EKRLNELKEQ AFQVVVRKKP 60 SQDLRRTNSM EW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT224373	1e-116	KT224373.1 Triticum aestivum cultivar RAC875 bZIP2 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020178558.1	2e-43	G-box-binding factor 4-like
Swissprot	Q0JHF1	1e-28	BZP12_ORYSJ; bZIP transcription factor 12
TrEMBL	A0A3B5Y2K6	4e-42	A0A3B5Y2K6_WHEAT; Uncharacterized protein
TrEMBL	A0A3B5Z0M3	5e-42	A0A3B5Z0M3_WHEAT; Uncharacterized protein
TrEMBL	A0A3B5ZWH4	4e-42	A0A3B5ZWH4_WHEAT; Uncharacterized protein
TrEMBL	A0A446K2K0	5e-42	A0A446K2K0_TRITD; Uncharacterized protein
STRING	BRADI2G24120.3	2e-42	(Brachypodium distachyon)
STRING	MLOC_53321.1	1e-42	(Hordeum vulgare)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2665	37	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	1e-07	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Sornaraj P,Luang S,Lopato S,Hrmova M Basic leucine zipper (bZIP) transcription factors involved in abiotic stresses: A molecular model of a wheat bZIP factor and implications of its structure in function. Biochim. Biophys. Acta, 2016. 1860(1 Pt A): p. 46-56 [PMID:26493723]