PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AL_158F8EE88.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 298aa    MW: 31376.1 Da    PI: 5.7595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AL_158F8EE88.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19148198255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp +ng  +r++lg+++tae+Aa a+++a+ +++g
  Traes_2AL_158F8EE88.2 148 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDTAEDAAVAYDRAAYRMRG 198
                            8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.20E-29147206No hitNo description
Gene3DG3DSA:3.30.730.105.7E-32147206IPR001471AP2/ERF domain
PfamPF008473.3E-13148198IPR001471AP2/ERF domain
SMARTSM003803.9E-38148212IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-23148208IPR016177DNA-binding domain
PROSITE profilePS5103224.21148206IPR001471AP2/ERF domain
PRINTSPR003671.4E-10149160IPR001471AP2/ERF domain
PRINTSPR003671.4E-10172188IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MLLNPASEAL VLDSIRQHLM EDTAAAAAPV AEARRQRPAY CRSASFGSLV ADQWSESLPF  60
RADDSDDMVV YGALRDAFSC GWLPDGSFAA VKPEPLLPSP DSAYACDGPS CFGFLEPETP  120
PATSPGEGEE EGAAFMGEAA AAVARGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTYD  180
TAEDAAVAYD RAAYRMRGSR ALLNFPLRIG SEIAAAHAAA AAAGDKRPSP EPATSDSSSS  240
SSSSGSPKRR KRGEAAAASM AMALVPPPSQ LSRPAHAWYP AAPVEQVAMA PRAQQLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-39144211168ATERF1
3gcc_A5e-39144211168ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF5701220.0EF570122.1 Triticum aestivum pathogen-inducible transcription factor ERF3 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151124.11e-158ethylene-responsive transcription factor 2-like
SwissprotQ404791e-56ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A3B6B3U60.0A0A3B6B3U6_WHEAT; Uncharacterized protein
TrEMBLA0A446LD790.0A0A446LD79_TRITD; Uncharacterized protein
STRINGTraes_2AL_158F8EE88.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-38ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]