PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_0B09B840B.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 279aa    MW: 30053.5 Da    PI: 6.9685
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_0B09B840B.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-16131180355
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            ++GVr ++ +g+++AeIrd + +g   r++lg+f+++e Aa a+++a+ +++g
  Traes_2BL_0B09B840B.1 131 FRGVRKRP-WGKFAAEIRDSTRDG--VRVWLGTFDSPEAAALAYDQAAFAIRG 180
                            89******.**********43354..***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.3E-33130194IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-28130189IPR001471AP2/ERF domain
PROSITE profilePS5103222.405130188IPR001471AP2/ERF domain
CDDcd000189.88E-17131190No hitNo description
SuperFamilySSF541716.15E-21131189IPR016177DNA-binding domain
PfamPF008471.7E-11131180IPR001471AP2/ERF domain
PRINTSPR003674.5E-9131142IPR001471AP2/ERF domain
PRINTSPR003674.5E-9154170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MSDPSSTASS YSTSPRLTTG VVNFLARRAM TTQNHHRAAA SLHSPGSSTG SADTAPWHHR  60
APATPPPLLP FHASDADEML LLDMLSQHQE DMHTDTATAP VPTATAATAV KREVSEEEEA  120
KVAAGGSRRA FRGVRKRPWG KFAAEIRDST RDGVRVWLGT FDSPEAAALA YDQAAFAIRG  180
GAAVLNFPAD QVRRSLEGAE DDVCGRADGL SPVLALKRRH SMHRRAATKQ KVRTVRTGRP  240
EGVMELEDLG AEYLEELLGL SDDMMTSASS SWCSSHHSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-241311881572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF5839404e-48EF583940.1 Triticum aestivum pathogen-inducible ethylene-responsive element-binding protein (PIEP1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155481.11e-152ethylene-responsive transcription factor 1B-like
TrEMBLA0A3B6CAK90.0A0A3B6CAK9_WHEAT; Uncharacterized protein
TrEMBLA0A446MK370.0A0A446MK37_TRITD; Uncharacterized protein
STRINGTraes_2BL_0B09B840B.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-34ethylene response factor 1
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]