PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_1E57B73B21.5
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 245aa    MW: 26086.3 Da    PI: 10.3578
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_1E57B73B21.5genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37.1e-1771120255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  Traes_2BL_1E57B73B21.5  71 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 120
                             7******99.**********732...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.08E-2670129No hitNo description
SuperFamilySSF541711.05E-2171130IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-3071129IPR001471AP2/ERF domain
PfamPF008472.6E-1071120IPR001471AP2/ERF domain
SMARTSM003801.4E-3571134IPR001471AP2/ERF domain
PROSITE profilePS5103222.58971128IPR001471AP2/ERF domain
PRINTSPR003676.4E-127283IPR001471AP2/ERF domain
PRINTSPR003676.4E-12110130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MQQGEYRSSS SSKGSAGSAA AAAAAAAAMA PLAAAAAAVA AKEEHNVTVA VAPPIPMAMA  60
MPLQQQQPRK QYRGVRMRKW GKWVAEIREP HKRTRIWLGS YATPVAAARA YDTAVFYLRG  120
RSARLNFPDE ISALALSSPE AAEAGAAGGE MAGELGDGGA LSAASIRKKA IEVGSRVDAL  180
QTGMTTMVAA PTHQRERQRL HHHHHAEPHG EELHRHVKQQ RTAWNGRAKN PDLNQAPSPD  240
TSDAE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-1570133468ATERF1
3gcc_A7e-1570133468ATERF1
5wx9_A2e-14711321476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00276DAPTransfer from AT2G23340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3538070.0AK353807.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1002O02.
GenBankAK3630750.0AK363075.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2012I21.
GenBankAK3644430.0AK364443.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2025D07.
GenBankKC8987980.0KC898798.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8987990.0KC898799.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988000.0KC898800.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988010.0KC898801.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988020.0KC898802.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988040.0KC898804.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988050.0KC898805.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988060.0KC898806.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988070.0KC898807.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988080.0KC898808.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988090.0KC898809.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988100.0KC898810.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988140.0KC898814.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988150.0KC898815.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988160.0KC898816.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988170.0KC898817.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
GenBankKC8988180.0KC898818.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191028.11e-100ethylene-responsive transcription factor ERF008-like
TrEMBLA0A3B6CET91e-175A0A3B6CET9_WHEAT; Uncharacterized protein
TrEMBLA0A446MTS51e-175A0A446MTS5_TRITD; Uncharacterized protein
STRINGTraes_2BL_1E57B73B21.51e-176(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39433075
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.13e-40DREB and EAR motif protein 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]