PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_2BS_169BEF991.2

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 692aa MW: 73714.4 Da PI: 9.2412

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_2BS_169BEF991.2	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.2	1e-14	243	304	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a+lk+++ Traes_2BS_169BEF991.2 243 EDDKRRARLVRNRESAHLSRQRKKQYLEELEGKVKAMQATIADLSTRISCVTAENAALKQQL 304 689********************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.7E-15	242	306	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.335	244	307	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.3E-12	244	304	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-13	246	304	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-15	246	305	No hit	No description
CDD	cd14704	2.49E-20	247	298	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0016021	Cellular Component	integral component of membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence Send to blast
FSAVPYKNNS SLFTNPAHNK PNNRLLPARA GPSQRPGERS RRVSRLTLAP PPPRVRFVST 60 TPKRRPTTRT ESPSFSSCLS FPFPSHIANP ARYGDRAARD PGPRPAARPA VAHALAVTGS 120 RAMALAEASP FADLPFPDDL PEFPHPGDDA FALDGFDLDD LDIDFDFDLD LDLLPTDDVQ 180 LPSPPPPLAT SSSSAGSPGG AGDSSSGSGG GADGALKNDE SSETSSRSAS AGSDGKAKDG 240 EGEDDKRRAR LVRNRESAHL SRQRKKQYLE ELEGKVKAMQ ATIADLSTRI SCVTAENAAL 300 KQQLAGAGGA GVPPPLPMYP GLYPLPPPWM HPAYAMGARG SQVPLMPIPR LKTKQPASAA 360 AEPPAKKSRK TKKVASVSLL GLLFLMMLCG CLVPAVNRMY GPVDSREGIV LGPSQSRHGR 420 VLAVDGPRDV SEGVDSKLPH NSSETLPALL YIPRNGKHVK INGNLVIQSV VASEKASSRM 480 CHSDGKTSCN QGQEDTSLAI PGHVAQLNSG EVMESAKAIK NKLMALPPGD GSIYREDDEL 540 LPQWFSEAMS GPMLSSGMCT EVFQFDISPT TIVPVYSSGM HNASHNSTEN LPSSQSHKVK 600 NRRILHSMAI PLKGSTSNHT DHLKAHPKNE SFAGNKPASS VVVSVLADPR VDADGRISSK 660 SLSRIFVVVL VDSVKYVTYS CVLPFKTHSP HL

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence Send to blast

FSAVPYKNNS SLFTNPAHNK PNNRLLPARA GPSQRPGERS RRVSRLTLAP PPPRVRFVST  60
TPKRRPTTRT ESPSFSSCLS FPFPSHIANP ARYGDRAARD PGPRPAARPA VAHALAVTGS  120
RAMALAEASP FADLPFPDDL PEFPHPGDDA FALDGFDLDD LDIDFDFDLD LDLLPTDDVQ  180
LPSPPPPLAT SSSSAGSPGG AGDSSSGSGG GADGALKNDE SSETSSRSAS AGSDGKAKDG  240
EGEDDKRRAR LVRNRESAHL SRQRKKQYLE ELEGKVKAMQ ATIADLSTRI SCVTAENAAL  300
KQQLAGAGGA GVPPPLPMYP GLYPLPPPWM HPAYAMGARG SQVPLMPIPR LKTKQPASAA  360
AEPPAKKSRK TKKVASVSLL GLLFLMMLCG CLVPAVNRMY GPVDSREGIV LGPSQSRHGR  420
VLAVDGPRDV SEGVDSKLPH NSSETLPALL YIPRNGKHVK INGNLVIQSV VASEKASSRM  480
CHSDGKTSCN QGQEDTSLAI PGHVAQLNSG EVMESAKAIK NKLMALPPGD GSIYREDDEL  540
LPQWFSEAMS GPMLSSGMCT EVFQFDISPT TIVPVYSSGM HNASHNSTEN LPSSQSHKVK  600
NRRILHSMAI PLKGSTSNHT DHLKAHPKNE SFAGNKPASS VVVSVLADPR VDADGRISSK  660
SLSRIFVVVL VDSVKYVTYS CVLPFKTHSP HL

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269\|PubMed:22050533}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305\|PubMed:22050533}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT753298	0.0	KT753298.1 Triticum aestivum bZIP transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020149137.1	0.0	bZIP transcription factor 60-like
Swissprot	Q8LIB3	0.0	BZP60_ORYSJ; bZIP transcription factor 60
TrEMBL	A0A3B6C1N3	0.0	A0A3B6C1N3_WHEAT; Uncharacterized protein
STRING	Traes_2BS_169BEF991.2	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11179	30	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	2e-73	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Oono Y, et al. Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide. Plant Biotechnol. J., 2010. 8(6): p. 691-718 [PMID:20331531] Hu J, et al. The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. Plant Physiol., 2011. 156(2): p. 856-72 [PMID:21487048] Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Ohta M, et al. Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] Cheng Q, et al. An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]