PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_2BS_C9A338257.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 307aa MW: 33434 Da PI: 7.058

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_2BS_C9A338257.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.3	2.1e-10	177	222	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ + +L++e +aL ++ Traes_2BS_C9A338257.1 177 KRVKRILANRQSAQRSRVRKLQYISELERSITSLQTEVSALSPRVA 222 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-13	173	237	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.645	175	231	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.97E-11	177	231	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.2E-13	177	231	No hit	No description
Pfam	PF00170	2.8E-9	177	227	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.56E-23	178	228	No hit	No description
PROSITE pattern	PS00036	0	180	195	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MAQLPPKIPT MAPAWQEFGG GHHHSAHARH HHHQRSPSMG AFLAAPMPPL PPPAPASGDG 60 AQPQPFWVDE FLDFSAAKRG AHRRTVSDST AFLDDSNAAA GANEFDRLDD SQLMSIFFDE 120 LAPQRQAQAA SASSPSDHNS INDEKQDKGD AEEAQSECNG DGAAPGQPSS AATVDPKRVK 180 RILANRQSAQ RSRVRKLQYI SELERSITSL QTEVSALSPR VAFLDHQRSL LTLGNSHLKQ 240 RIAALARDKI FKDAHQEALK KEIERLRQIY QQQSLRNVEP PAHDDGRPLA RSDNNGLIAG 300 EGTAAPS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269\|PubMed:18065552}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020174877.1	1e-172	basic leucine zipper 2-like
Swissprot	Q5QNI5	1e-105	BZP02_ORYSJ; Basic leucine zipper 2
TrEMBL	A0A3B6ATW9	0.0	A0A3B6ATW9_WHEAT; Uncharacterized protein
STRING	Traes_2BS_C9A338257.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-84	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]