PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_07E54848B.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 69aa    MW: 7684.9 Da    PI: 10.5438
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_07E54848B.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like46.48.9e-151282855
                G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55
                           tPk +l+lm +kgLtl+h+kSHLQkYRl
  Traes_2DL_07E54848B.1  1 TPKGVLRLMAMKGLTLYHLKSHLQKYRL 28
                           9**************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015573.7E-9129IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.4E-13129IPR009057Homeodomain-like
SuperFamilySSF466893.4E-5131IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
TPKGVLRLMA MKGLTLYHLK SHLQKYRLGK QSKKSTDLEL ANSGDFTTQD INFQIGAPLV  60
VPAERDTGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3715128e-71AK371512.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2136B23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164352.12e-42myb family transcription factor PHL11-like
TrEMBLA0A1D5UMM04e-41A0A1D5UMM0_WHEAT; Uncharacterized protein
TrEMBLA0A453CUW94e-41A0A453CUW9_AEGTS; Uncharacterized protein
TrEMBLN1QYN57e-41N1QYN5_AEGTA; Myb family transcription factor APL
STRINGEMT162251e-41(Aegilops tauschii)
STRINGTraes_2DL_07E54848B.14e-44(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.19e-14G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]