PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_1F0CDB1CE.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 131aa    MW: 14340 Da    PI: 10.7896
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_1F0CDB1CE.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-1457113662
                            HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                            +  r++kNRe+A rsR+RK+a+++eLe++v  L + N +Lk + ++l+ e+a+l+++
  Traes_2DL_1F0CDB1CE.1  57 KSVRAMKNRESALRSRARKRAYTQELEKEVRRLVEDNLKLKRQCKQLQSEIAALTAQ 113
                            568*************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-1251116IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.80654110IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-1257112No hitNo description
Gene3DG3DSA:1.20.5.1705.6E-1458113No hitNo description
PfamPF001702.4E-1159112IPR004827Basic-leucine zipper domain
CDDcd147079.66E-1860110No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MSWEEPGSPQ LSLSGFSSLA SISSTAAPPA RLPSLSLSIG TGGEDQQLGV SSDDGHKSVR  60
AMKNRESALR SRARKRAYTQ ELEKEVRRLV EDNLKLKRQC KQLQSEIAAL TAQQASNKQS  120
SPHRRTSSTQ F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3599581e-176AK359958.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020174160.15e-90bZIP transcription factor 27-like
TrEMBLA0A3B6DK731e-88A0A3B6DK73_WHEAT; Uncharacterized protein
TrEMBLA0A453D0941e-88A0A453D094_AEGTS; Uncharacterized protein
STRINGTraes_2DL_1F0CDB1CE.12e-89(Triticum aestivum)
STRINGTraes_2DL_1F0CDB1CE1.12e-89(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-11bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]