PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_5610BA574.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 151aa    MW: 16409.6 Da    PI: 9.9367
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_5610BA574.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.21.5e-1277122348
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                            +++r+rr++kNRe+A rsR+RK+a + e e +  +L  eN++L+++
  Traes_2DL_5610BA574.1  77 DDRRQRRMIKNRESAARSRARKQACTNEMELELVQLRRENRMLIQR 122
                            689****************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-875138IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.92177122IPR004827Basic-leucine zipper domain
PfamPF001701.0E-978122IPR004827Basic-leucine zipper domain
CDDcd147071.56E-2079119No hitNo description
Gene3DG3DSA:1.20.5.1709.8E-1179122No hitNo description
SuperFamilySSF579593.88E-1079125No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
PYRGAAHPQD YLAGAVPQPP RTPPPHTALT LEFTCPGGTG AANSATSSGD DPAGCHFGFS  60
ASGGASKRAA VQPAAGDDRR QRRMIKNRES AARSRARKQA CTNEMELELV QLRRENRMLI  120
QREQDFINVH TATSLFAVYS VIISYLKMLL L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3758365e-43AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185454.17e-91bZIP transcription factor 27-like
TrEMBLA0A453DBK91e-107A0A453DBK9_AEGTS; Uncharacterized protein
STRINGTraes_2DL_5610BA574.11e-108(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.27e-16basic region/leucine zipper motif 27
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]